Merge denoised pairs of forward and reverse reads inside an MultiAmplicon object.
mergeMulti(MA, mc.cores = getOption("mc.cores", 1L), ...)
MA |
|
---|---|
mc.cores | number or compute cores for parallel merging of different amplicons (values > 1 are only allowed on Unix/Linux systems). |
... | additional arguments to be passed to the
|
A MultiAmplicon-class object with the mergers slot filled.
This is a wrapper for mergePairs
from
dada2
. It works on an MultiAmplicon-class
object with derep and dada slots filled. Use
dadaMulti
and derepMulti
on a amplicon
sorted (see sortAmplicons
)
MultiAmplicon-class
object to preprocess your
multi-marker data to this point.
Emanuel Heitlinger