toPhyloseq — toPhyloseq • MultiAmplicon

Populate a phyloseq object with the contents of a MultiAmplicon object

toPhyloseq(MA, samples, multi2Single = TRUE, ...)

Arguments

MA	MultiAmplicon object with the `taxonTable` and `sequenceTableNoChime` slots filled.
samples	samples to include in phyloseq object
multi2Single	should data from different amplicon be combined into one phyloseq object (TRUE) or should a list of seperate objects, one for each amplicon, be returned?
...	additional arguments to be passed to `phyloseq`

a phyloseq object

Information stored in a MultiAmplicon object is transferred to a phyloseq object.

Emanuel Heitlinger